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Molecular Epidemiology of Microorganisms
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Editor(s):
Dominique A. Caugant
Publication date
(Print):
2009
Publisher:
Humana Press
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Related collections
Journal of Self-Assembly and Molecular Electronics
Author and book information
Book
ISBN (Print):
978-1-60327-998-7
ISBN (Electronic):
978-1-60327-999-4
Publication date (Print):
2009
DOI:
10.1007/978-1-60327-999-4
SO-VID:
a89ff538-47f7-4629-bba1-7fddbdd5ae05
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Book chapters
pp. 1
Coronaviruses: An Updated Overview of Their Replication and Pathogenesis
pp. 1
Visualization and Analysis of Protein Structures with LiteMol Suite
pp. 1
Microbial Molecular Epidemiology: An Overview
pp. 3
Multiple Roles of Jasmonates in Shaping Rhizotaxis: Emerging Integrators
pp. 13
Multilocus Enzyme Electrophoresis for Parasites and Other Pathogens
pp. 15
Comparative Protein Structure Analysis with Bio3D-Web
pp. 23
Phenotyping of Light Response on JA-Defective Mutant in Rice
pp. 33
Discovery of Novel Coronaviruses in Rodents
pp. 27
Plasmid Replicon Typing
pp. 29
Using Dali for Protein Structure Comparison
pp. 29
Techniques to Determine the Effects of Jasmonates on Root Hydraulic Conductivity
pp. 41
Detection and Discovery of Coronaviruses in Wild Bird Populations
pp. 37
The Application of Randomly Amplified DNA Analysis in the Molecular Epidemiology of Microorganisms
pp. 43
Role of Jasmonates in Beneficial Microbe–Root Interactions
pp. 43
Assessing Protein Function Through Structural Similarities with CATH
pp. 55
Competitive ELISA for the Detection of Serum Antibodies Specific for Middle East Respiratory Syndrome Coronavirus (MERS-CoV)
pp. 49
Use of Repetitive Element Palindromic PCR (rep-PCR) for the Epidemiologic Discrimination of Foodborne Pathogens
pp. 59
Protein Thermal Stability Engineering Using HoTMuSiC
pp. 67
Whole-Genome Sequencing Protocols for IBV and Other Coronaviruses Using High-Throughput Sequencing
pp. 69
Plant–Insect Bioassay for Testing Arabidopsis Resistance to the Generalist Herbivore Spodoptera littoralis
pp. 59
Pulsed-Field Gel Electrophoresis for Molecular Epidemiology of Food Pathogens
pp. 75
Contact Area-Based Structural Analysis of Proteins and Their Complexes Using CAD-Score
pp. 77
Isolation and Tissue Culture Adaptation of Porcine Deltacoronavirus: A Case Study
pp. 79
Targeted Metabolomics of Plant Hormones and Redox Metabolites in Stomatal Immunity
pp. 71
Molecular Genotyping of Microbes by Multilocus PCR and Mass Spectrometry: A New Tool for Hospital Infection Control and Public Health Surveillance
pp. 89
The Preparation of Chicken Kidney Cell Cultures for Virus Propagation
pp. 91
A Comprehensive Computational Platform to Guide Drug Development Using Graph-Based Signature Methods
pp. 93
Bioassays to Evaluate the Resistance of Whole Plants to the Herbivorous Insect Thrips
pp. 107
Systematic Exploration of Binding Modes of Ligands on Drug Targets
pp. 109
Role of Jasmonate in Modulation of Mycorrhizae-Induced Resistance Against Fungal Pathogens
pp. 89
Amplified Fragment Length Polymorphism Analysis
pp. 97
The Preparation of Chicken Tracheal Organ Cultures and Their Application for Ciliostasis Test, Growth Kinetics Studies, and Virus Propagation
pp. 105
Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) for the Genotyping of Bacterial Pathogens
pp. 107
Isolation and Propagation of Coronaviruses in Embryonated Eggs
pp. 117
Establishment of Actinorhizal Symbiosis in Response to Ethylene, Salicylic Acid, and Jasmonate
pp. 123
Using MemBlob to Analyze Transmembrane Regions Based on Cryo-EM Maps
pp. 117
Spoligotyping for Molecular Epidemiology of the Mycobacterium tuberculosis Complex
pp. 119
Well-Differentiated Primary Mammalian Airway Epithelial Cell Cultures
pp. 131
Structural Characterization of Protein–Protein Interactions with pyDockSAXS
pp. 133
Crystallization of a Complex Between MYC and Jas Motif
pp. 129
Multilocus Sequence Typing
pp. 135
Quantification of Coronaviruses by Titration In Vitro and Ex Vivo
pp. 145
Protein–Protein Modeling Using Cryo-EM Restraints
pp. 145
A Fluorescence Anisotropy-Based Comprehensive Method for the In Vitro Screening of COI1–JAZs Agonists and Antagonists
pp. 141
Multiple Locus Variable Number of Tandem Repeats Analysis
pp. 147
Transient Dominant Selection for the Modification and Generation of Recombinant Infectious Bronchitis Coronaviruses
pp. 161
Use of Fluorescent Reporters to Analyse Dynamic and Spatial Responses to Mechanical Wounding
pp. 163
Modeling of Multimolecular Complexes
pp. 159
Comparison of Molecular Typing Methods Applied to Clostridium difficile
pp. 167
In-Yeast Assembly of Coronavirus Infectious cDNA Clones Using a Synthetic Genomics Pipeline
pp. 169
Quantitative Jasmonate Profiling Using a High-Throughput UPLC-NanoESI-MS/MS Method
pp. 175
Biological Assembly Comparison with VAST+
pp. 173
Genotyping of Mycobacterium tuberculosis Clinical Isolates Using IS6110-Based Restriction Fragment Length Polymorphism Analysis
pp. 187
BioMagResBank (BMRB) as a Resource for Structural Biology
pp. 187
Proximity Labeling for the Identification of Coronavirus–Host Protein Interactions
pp. 189
Detection of Fungal Jasmonates by Liquid Chromatography Paired with Mass Spectrometry
pp. 189
spa Typing for Epidemiological Surveillance of Staphylococcus aureus
pp. 199
CRISPR/Cas9-Mediated Gene Editing of the Jasmonate Biosynthesis OsAOC Gene in Rice
pp. 205
Using Yeast to Identify Coronavirus–Host Protein Interactions
pp. 219
Integrating Molecular Simulation and Experimental Data: A Bayesian/Maximum Entropy Reweighting Approach
pp. 203
Sequencing of Viral Genes
pp. 211
Mass Spectrometric Approaches to Study the Metabolism of Jasmonates: Biotransformation of Exogenously Supplemented Methyl Jasmonate by Cell Suspension Cultures of Moringa oleifera
pp. 223
Determining How Coronaviruses Overcome the Interferon and Innate Immune Response
pp. 241
Evaluation and Selection of Dynamic Protein Structural Ensembles with CoNSEnsX+
pp. 217
Full Sequencing of Viral Genomes: Practical Strategies Used for the Amplification and Characterization of Foot-and-Mouth Disease Virus
pp. 231
Ribopuromycylation in Coronavirus-Infected Cells
pp. 231
Bacterial Genome Sequencing
pp. 241
Visualizing Coronavirus Entry into Cells
pp. 249
DNA Microarray for Molecular Epidemiology of Salmonella
pp. 263
Preparation of Cultured Cells Using High-Pressure Freezing and Freeze Substitution for Subsequent 2D or 3D Visualization in the Transmission Electron Microscope
pp. 287
Methods for Data Analysis
pp. 305
Internet-Based Sequence-Typing Databases for Bacterial Molecular Epidemiology
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