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      A Brief History of the Impact of Potato Genetics on the Breeding of Tetraploid Potato Cultivars for Tuber Propagation

      Potato Research
      Springer Science and Business Media LLC

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          Abstract

          The principal cultivated potato ( Solanum tuberosum) has mainly been vegetatively propagated through its tubers. Potato breeders have therefore made planned artificial hybridizations to generate genetically unique seedlings and their clonal descendants from which to select new cultivars for tuber propagation. After the initial hybridizations, no more sexual reproduction was required to produce a successful new cultivar, which depended on choosing the correct breeding objectives and the ability to recognize a clone that met those objectives. Any impact of the new science of genetics after 1900 needed to be through the production of parental material of known genetic constitution and predictable offspring. This included making use of the many wild tuber-bearing relatives of the potato in Central and South America, as well as the abundance of landraces in South America. This review looks at the history of how potato geneticists: 1) established that the principal cultivated potato is a tetraploid that displays tetrasomic inheritance (2 n = 4 x = 48); 2) developed progeny tests to determine the dosage of major genes for qualitative traits in potential parents, and also progeny tests for their general combining abilities for quantitative traits; and 3) provided molecular markers for the marker assisted selection of major genes and quantitative trait alleles of large effect, and for the genomic selection of many alleles of small effect. It is argued that the concepts of population genetics are required by breeders, once a number of cycles of hybridization and cultivar production are considered for the genetic improvement of potato crops.

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          Most cited references134

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          Introduction to Quantitative Genetics

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            Prediction of Total Genetic Value Using Genome-Wide Dense Marker Maps

            Recent advances in molecular genetic techniques will make dense marker maps available and genotyping many individuals for these markers feasible. Here we attempted to estimate the effects of ∼50,000 marker haplotypes simultaneously from a limited number of phenotypic records. A genome of 1000 cM was simulated with a marker spacing of 1 cM. The markers surrounding every 1-cM region were combined into marker haplotypes. Due to finite population size (Ne = 100), the marker haplotypes were in linkage disequilibrium with the QTL located between the markers. Using least squares, all haplotype effects could not be estimated simultaneously. When only the biggest effects were included, they were overestimated and the accuracy of predicting genetic values of the offspring of the recorded animals was only 0.32. Best linear unbiased prediction of haplotype effects assumed equal variances associated to each 1-cM chromosomal segment, which yielded an accuracy of 0.73, although this assumption was far from true. Bayesian methods that assumed a prior distribution of the variance associated with each chromosome segment increased this accuracy to 0.85, even when the prior was not correct. It was concluded that selection on genetic values predicted from markers could substantially increase the rate of genetic gain in animals and plants, especially if combined with reproductive techniques to shorten the generation interval.
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              Genome sequence and analysis of the tuber crop potato.

              Potato (Solanum tuberosum L.) is the world's most important non-grain food crop and is central to global food security. It is clonally propagated, highly heterozygous, autotetraploid, and suffers acute inbreeding depression. Here we use a homozygous doubled-monoploid potato clone to sequence and assemble 86% of the 844-megabase genome. We predict 39,031 protein-coding genes and present evidence for at least two genome duplication events indicative of a palaeopolyploid origin. As the first genome sequence of an asterid, the potato genome reveals 2,642 genes specific to this large angiosperm clade. We also sequenced a heterozygous diploid clone and show that gene presence/absence variants and other potentially deleterious mutations occur frequently and are a likely cause of inbreeding depression. Gene family expansion, tissue-specific expression and recruitment of genes to new pathways contributed to the evolution of tuber development. The potato genome sequence provides a platform for genetic improvement of this vital crop. ©2011 Macmillan Publishers Limited. All rights reserved
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                Author and article information

                Journal
                Potato Research
                Potato Res.
                Springer Science and Business Media LLC
                0014-3065
                1871-4528
                September 2022
                January 22 2022
                September 2022
                : 65
                : 3
                : 461-501
                Article
                10.1007/s11540-021-09517-w
                2b20b9b5-6f74-47f5-8a39-1d777b28e37f
                © 2022

                https://creativecommons.org/licenses/by/4.0

                https://creativecommons.org/licenses/by/4.0

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